Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 Z98755.1-201ENST00000407015 1384 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC015871.4-201ENST00000624650 2260 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 SNORA43.1-201ENST00000364863 140 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 SNORA37-201ENST00000384504 129 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 USP9YP9-201ENST00000429406 715 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 BMS1P19-201ENST00000433925 393 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 C1GALT1P3-201ENST00000522049 819 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC023827.2-201ENST00000566880 1061 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC093278.2-201ENST00000564956 2485 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC104837.1-201ENST00000444644 1587 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AL353625.1-202ENST00000366273 571 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AL133325.1-201ENST00000421090 382 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 RSL24D1P6-201ENST00000426934 401 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 IGKV3D-31-201ENST00000519131 281 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 RBMY1HP-201ENST00000382759 1389 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC007842.1-201ENST00000597336 2039 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 HMGA1P8-201ENST00000414130 321 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 BTF3P13-201ENST00000513224 490 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AC016144.1-201ENST00000548175 1087 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 GLUD1P2-201ENST00000583339 201 ntBASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HMCN2Q8NDA2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC092570.3-201ENST00000420113 693 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 RPS23P7-201ENST00000466210 444 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 PPM1AP1-201ENST00000502740 1135 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC125238.2-201ENST00000430003 1440 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 AC026464.2-201ENST00000567834 2421 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 CASC19-248ENST00000641674 1356 ntBASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC3.37□□□□□ -1.87
HMCN2Q8NDA2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms