Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 AC110048.2-201ENST00000617013 6721 ntBASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC10.09□□□□□ -0.79
RIMBP3Q9UFD9 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 SNORD16-201ENST00000362803 99 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 RNA5SP234-201ENST00000363916 119 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 CRYGGP-201ENST00000443337 145 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 AL034399.1-201ENST00000451535 380 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 AC092865.4-201ENST00000477936 615 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL714P-201ENST00000487050 298 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 AC090958.1-201ENST00000511122 351 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 OR1F2P-201ENST00000570470 933 ntBASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RIMBP3Q9UFD9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC005042.1-201ENST00000393397 800 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 RPS7P8-201ENST00000418311 581 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 MRPS5P4-201ENST00000592830 325 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AL121612.2-201ENST00000612261 482 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AL356317.1-201ENST00000396110 1436 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 CYP4F29P-201ENST00000420685 446 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 FTLP8-201ENST00000446770 267 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 OR2AO1P-201ENST00000476497 403 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL382P-201ENST00000482631 282 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC021269.1-201ENST00000526860 705 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AP001858.2-201ENST00000536213 601 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC005244.1-201ENST00000582566 339 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 FKBP1AP1-201ENST00000594588 318 ntBASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RIMBP3Q9UFD9 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms