Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 AC090774.4-201ENST00000578888 1372 ntBASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC71LQ8N9Z2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 KYNUP2-201ENST00000582280 1329 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC105749.1-201ENST00000631338 2008 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LCN1P2-201ENST00000372030 223 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 NACAP7-201ENST00000407371 609 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC097721.1-201ENST00000427150 1253 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC007365.2-201ENST00000428806 458 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC018804.1-201ENST00000430381 618 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RPS2P25-201ENST00000467247 580 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL216P-201ENST00000471607 298 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RPS26P6-201ENST00000475156 348 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 MARK2P8-201ENST00000476069 952 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC117392.1-201ENST00000487061 596 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RNA5SP278-201ENST00000517055 102 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 OR4A6P-201ENST00000534364 970 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL049869.4-201ENST00000555669 178 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 MIR3159-201ENST00000584572 74 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC007262.1-201ENST00000604099 321 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL035410.2-201ENST00000604963 864 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 MIR6834-201ENST00000622807 81 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL121936.2-201ENST00000641935 662 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AC073365.1-203ENST00000641055 1992 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 NR1H5P-201ENST00000452683 1377 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC71LQ8N9Z2 RACGAP1P-201ENST00000550663 1879 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL731532.1-201ENST00000623972 4236 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL512329.1-201ENST00000404600 1592 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 SNORA70.5-201ENST00000365519 135 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 HMGB1P39-201ENST00000366304 880 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 DPPA2P2-201ENST00000418220 897 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms