Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.74□□□□□ -1.17
SHROOM1Q2M3G4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC061975.7-201ENST00000592016 2692 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AL663061.1-201ENST00000416625 580 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 MTND2P12-201ENST00000417560 1252 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC002127.1-201ENST00000421305 225 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 BX119917.1-201ENST00000432517 502 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 RPL19P11-201ENST00000495944 589 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 RNA5SP418-201ENST00000515951 117 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 SNORA74.1-201ENST00000516320 180 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 RN7SKP70-201ENST00000516655 271 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 RNA5SP206-201ENST00000516703 121 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC004232.1-201ENST00000571388 208 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 MIR6778-201ENST00000617912 73 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 AC127070.3-201ENST00000503695 3263 ntBASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SHROOM1Q2M3G4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 MIR188-201ENST00000385034 86 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RBBP4P5-201ENST00000398583 1266 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 GCNT1P4-201ENST00000404096 329 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 MIR1204-201ENST00000408388 67 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AL929472.1-201ENST00000417484 429 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC108479.1-201ENST00000431142 427 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC007679.3-201ENST00000434035 414 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 HMGN1P2-201ENST00000445197 310 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC093166.3-201ENST00000448785 303 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 Z83838.1-202ENST00000456225 839 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RN7SL362P-201ENST00000494228 267 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC122718.2-201ENST00000505325 591 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC005632.2-201ENST00000564271 828 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RN7SL230P-201ENST00000580835 303 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AL049840.5-201ENST00000602827 552 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 PCA3_2.1-201ENST00000612507 409 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 CASC19-274ENST00000642018 970 ntBASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.72□□□□□ -1.17
SHROOM1Q2M3G4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.71□□□□□ -1.17
SHROOM1Q2M3G4 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms