Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL3L1P16619 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC079248.1-201ENST00000427568 1546 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCL3L1P16619 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 FO082842.1-201ENST00000423552 1370 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 TNPO1P2-201ENST00000426249 2665 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL3L1P16619 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCL3L1P16619 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC008171.1-201ENST00000395058 200 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 WDR82P2-201ENST00000444540 928 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AL034369.1-201ENST00000453808 477 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AL139156.3-201ENST00000454802 394 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 RPS4XP17-201ENST00000479057 754 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL3L1P16619 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AP000662.1-201ENST00000530952 487 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL3L1P16619 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 RPL7AP69-201ENST00000595306 806 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AC245052.7-201ENST00000601161 359 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 AL445647.2-201ENST00000615170 130 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL3L1P16619 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCL3L1P16619 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC022613.3-201ENST00000560740 1346 ntBASIC5.43□□□□□ -1.54
CCL3L1P16619 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCL3L1P16619 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL3L1P16619 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RBPJP6-201ENST00000411556 1431 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 RNU1-46P-201ENST00000384425 164 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AL033519.1-201ENST00000407266 307 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AL589794.1-201ENST00000424971 390 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.42□□□□□ -1.54
CCL3L1P16619 CCNJP1-201ENST00000450600 1149 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 RN7SL83P-201ENST00000468131 297 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RN7SL502P-201ENST00000481857 290 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.42□□□□□ -1.54
CCL3L1P16619 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL3L1P16619 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AL162632.2-201ENST00000553933 399 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RN7SL66P-201ENST00000582099 264 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 MIR6885-201ENST00000612241 66 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AC005899.6-201ENST00000620729 297 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 MRPL57P1-201ENST00000621486 265 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 MIR6503-201ENST00000622884 86 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AC073862.4-201ENST00000622982 854 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL3L1P16619 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL3L1P16619 API5P1-201ENST00000424316 1510 ntBASIC5.42□□□□□ -1.54
CCL3L1P16619 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCL3L1P16619 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms