Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NDUFA3P1-201ENST00000588007 252 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL953862.2-201ENST00000603089 820 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC113361.1-201ENST00000606683 543 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MIR6732-201ENST00000619365 60 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC087893.2-201ENST00000623272 255 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC016542.3-201ENST00000623520 619 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFT1Q96AA3 AC067942.1-201ENST00000488045 1493 ntBASIC5.96□□□□□ -1.45
RFT1Q96AA3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.96□□□□□ -1.45
RFT1Q96AA3 AC093297.3-201ENST00000607056 2517 ntBASIC5.96□□□□□ -1.45
RFT1Q96AA3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RFT1Q96AA3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFT1Q96AA3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.96□□□□□ -1.45
RFT1Q96AA3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 TYMSP1-201ENST00000407851 869 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC013410.1-201ENST00000436223 1232 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AL604028.2-201ENST00000437848 788 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 REG1CP-206ENST00000447469 496 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AL359839.1-201ENST00000451975 1160 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 WBP1LP1-201ENST00000460451 896 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC008620.1-201ENST00000468453 592 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 CR383656.1-201ENST00000484916 377 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 RN7SKP67-201ENST00000515905 235 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 SCARNA6-201ENST00000515982 265 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 OR5M4P-201ENST00000529436 925 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC090115.2-201ENST00000548060 883 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC023389.2-201ENST00000580031 955 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 FXYD6P1-201ENST00000604857 285 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC022960.2-201ENST00000616300 666 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AC006213.6-201ENST00000623722 4179 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFT1Q96AA3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 AL121839.2-201ENST00000565058 6943 ntBASIC5.96□□□□□ -1.46
RFT1Q96AA3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RFT1Q96AA3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.95□□□□□ -1.46
RFT1Q96AA3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RFT1Q96AA3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.95□□□□□ -1.46
RFT1Q96AA3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFT1Q96AA3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.95□□□□□ -1.46
RFT1Q96AA3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms