Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SLC1A1P43005 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 CLCN3P1-201ENST00000423965 1017 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 RN7SL849P-201ENST00000485236 295 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.94□□□□□ -1.3
SLC1A1P43005 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 AL390198.2-201ENST00000510553 222 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 SETP17-201ENST00000534163 817 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 AL162632.2-201ENST00000553933 399 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AL049829.3-202ENST00000604278 711 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.94□□□□□ -1.3
SLC1A1P43005 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.94□□□□□ -1.3
SLC1A1P43005 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.94□□□□□ -1.3
SLC1A1P43005 AL121936.2-201ENST00000641935 662 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SLC1A1P43005 TUBBP10-201ENST00000427668 1301 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 AC127024.8-201ENST00000623719 2094 ntBASIC6.94□□□□□ -1.3
SLC1A1P43005 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.94□□□□□ -1.3
SLC1A1P43005 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.93□□□□□ -1.3
SLC1A1P43005 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 SNORA38B-201ENST00000363524 131 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 RNA5SP442-201ENST00000365050 107 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC024937.2-201ENST00000411669 1242 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.93□□□□□ -1.3
SLC1A1P43005 RN7SL868P-201ENST00000485915 303 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC084337.1-201ENST00000524809 686 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC126323.4-201ENST00000566935 234 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 MIR378C-201ENST00000578683 81 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC018692.2-201ENST00000624130 348 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 AL512353.3-201ENST00000417517 1326 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms