Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 CASC19-228ENST00000641414 1684 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 RPL7AP51-201ENST00000422016 760 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 RBMY2HP-201ENST00000457961 720 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 OR7A11P-201ENST00000597719 953 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC004908.3-201ENST00000610248 625 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC244100.4-201ENST00000617747 388 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC089999.3-201ENST00000622440 577 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AC004777.1-201ENST00000624317 287 ntBASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BHLHA9Q7RTU4 AL139384.2-201ENST00000613809 3590 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 LPAL2-203ENST00000454031 2498 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 RPL31P11-201ENST00000426558 1558 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 RN7SKP184-201ENST00000362348 333 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 RN7SKP221-201ENST00000410420 301 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 RPL23AP85-201ENST00000421838 433 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 TMF1P1-201ENST00000576058 373 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AL589765.6-201ENST00000601909 549 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC144521.1-201ENST00000607148 956 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC093783.1-201ENST00000612976 329 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 U1.41-201ENST00000617626 165 ntBASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
BHLHA9Q7RTU4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
BHLHA9Q7RTU4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
BHLHA9Q7RTU4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 LINC02035-201ENST00000610128 5476 ntBASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
BHLHA9Q7RTU4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms