Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC233702.7-202ENST00000582941 211 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 BOLA2P1-201ENST00000584794 232 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AP001120.4-201ENST00000590231 108 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC025171.4-201ENST00000607250 1047 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL445649.1-201ENST00000615941 691 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 RN7SL126P-201ENST00000616400 299 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC133485.6-201ENST00000624045 688 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL451064.2-201ENST00000623514 1654 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
HLA-DQB1P01920 AC083837.1-201ENST00000565297 2994 ntBASIC5.71□□□□□ -1.49
HLA-DQB1P01920 MARK2P4-201ENST00000503381 2380 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 GAPDHP20-201ENST00000444107 1007 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 MEF2AP1-201ENST00000454867 863 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 RPLP0P1-201ENST00000457002 361 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 RN7SL228P-201ENST00000470060 303 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 CR383656.1-201ENST00000484916 377 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 OR5M6P-201ENST00000530227 937 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 OR4H6P-201ENST00000563771 921 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC005495.1-201ENST00000586611 1211 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC004241.2-201ENST00000614562 444 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC135068.11-201ENST00000636378 921 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AL359976.1-201ENST00000418655 3528 ntBASIC5.71□□□□□ -1.5
HLA-DQB1P01920 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB1P01920 AC087516.1-201ENST00000561236 2428 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL355488.2-201ENST00000609909 2850 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL359263.1-201ENST00000441188 2796 ntBASIC5.7□□□□□ -1.5
HLA-DQB1P01920 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB1P01920 AL121977.1-201ENST00000401636 979 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms