Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AC097634.1-201ENST00000604491 2467 ntBASIC6.18□□□□□ -1.42
SHC1P29353 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.17□□□□□ -1.42
SHC1P29353 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHC1P29353 RNA5SP152-201ENST00000365184 110 ntBASIC6.17□□□□□ -1.42
SHC1P29353 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 AC083855.1-201ENST00000440041 258 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 RPL23AP28-201ENST00000448062 470 ntBASIC6.17□□□□□ -1.42
SHC1P29353 MEF2AP1-201ENST00000454867 863 ntBASIC6.17□□□□□ -1.42
SHC1P29353 EIF3LP2-201ENST00000457262 807 ntBASIC6.17□□□□□ -1.42
SHC1P29353 RN7SL492P-201ENST00000460700 295 ntBASIC6.17□□□□□ -1.42
SHC1P29353 RN7SL390P-201ENST00000470634 284 ntBASIC6.17□□□□□ -1.42
SHC1P29353 RN7SL655P-201ENST00000486087 298 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC018639.1-201ENST00000492994 442 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC139272.1-201ENST00000505516 640 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 AC093325.1-201ENST00000508378 326 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 IGKV2D-38-201ENST00000518423 240 ntBASIC6.17□□□□□ -1.42
SHC1P29353 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 AC140063.1-201ENST00000541343 259 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.17□□□□□ -1.42
SHC1P29353 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 MIR378C-201ENST00000578683 81 ntBASIC6.17□□□□□ -1.42
SHC1P29353 MIR4312-201ENST00000579909 76 ntBASIC6.17□□□□□ -1.42
SHC1P29353 RN7SL32P-201ENST00000580514 281 ntBASIC6.17□□□□□ -1.42
SHC1P29353 MIR5010-201ENST00000582846 120 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.17□□□□□ -1.42
SHC1P29353 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 AC007255.2-201ENST00000604053 631 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC004908.1-201ENST00000606572 541 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC116165.3-201ENST00000614524 400 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHC1P29353 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
SHC1P29353 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 AL354702.2-202ENST00000641481 890 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SHC1P29353 AC005618.1-201ENST00000606901 3148 ntBASIC6.17□□□□□ -1.42
SHC1P29353 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 AC095038.1-201ENST00000429248 1591 ntBASIC6.17□□□□□ -1.42
SHC1P29353 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.17□□□□□ -1.42
SHC1P29353 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.17□□□□□ -1.42
SHC1P29353 NEK2P4-201ENST00000425793 1329 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AL512310.3-201ENST00000547023 1335 ntBASIC6.17□□□□□ -1.42
SHC1P29353 AC119674.1-204ENST00000641348 1343 ntBASIC6.17□□□□□ -1.42
SHC1P29353 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.17□□□□□ -1.42
SHC1P29353 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHC1P29353 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHC1P29353 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.16□□□□□ -1.42
SHC1P29353 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHC1P29353 CUBNP3-201ENST00000457461 1784 ntBASIC6.16□□□□□ -1.42
SHC1P29353 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHC1P29353 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
SHC1P29353 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SHC1P29353 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHC1P29353 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms