Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DRB4X5D2U9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 SLC29A4P1-201ENST00000398760 971 ntBASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 NCF1B-203ENST00000435988 1254 ntBASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 AC083906.2-201ENST00000511578 360 ntBASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DRB4X5D2U9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 GPX1P1-201ENST00000388829 606 ntBASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 BX276092.2-201ENST00000417668 665 ntBASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 AC087289.5-201ENST00000586076 3175 ntBASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DRB4X5D2U9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DRB4X5D2U9 C2orf69P4-201ENST00000565394 541 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms