Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 AC233263.1-201ENST00000578059 224 ntBASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 PHGDH-210ENST00000641115 1638 ntBASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 AC133681.1-201ENST00000465482 601 ntBASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNMT3AQ9Y6K1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC124283.5-201ENST00000624661 1809 ntBASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC142381.4-202ENST00000563973 229 ntBASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 LINC01521-201ENST00000504184 1943 ntBASIC19.47■□□□□ 0.71
DNMT3AQ9Y6K1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 GCSHP5-201ENST00000443090 522 ntBASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 RPPH1-201ENST00000516869 333 ntBASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 C1QBPP2-201ENST00000528754 825 ntBASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 RNF165-205ENST00000588679 2904 ntBASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DNMT3AQ9Y6K1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNMT3AQ9Y6K1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DNMT3AQ9Y6K1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.45■□□□□ 0.7
DNMT3AQ9Y6K1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNMT3AQ9Y6K1 LINC01006-201ENST00000333319 2292 ntBASIC19.45■□□□□ 0.7
DNMT3AQ9Y6K1 TFP1-202ENST00000475455 1573 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms