Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 RN7SL850P-201ENST00000579959 291 ntBASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX11Q9Y5W9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 AC004264.1-201ENST00000608354 794 ntBASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX11Q9Y5W9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX11Q9Y5W9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 RBM17P1-201ENST00000453646 1190 ntBASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 AP002982.1-201ENST00000492365 877 ntBASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 NUDT16P1-203ENST00000513809 620 ntBASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 AL445228.2-201ENST00000605589 952 ntBASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 MIR6786-201ENST00000616843 113 ntBASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX11Q9Y5W9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 REXO1L10P-201ENST00000615707 1290 ntBASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX11Q9Y5W9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 KRT8P9-201ENST00000558927 1449 ntBASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms