Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 FAM201B-201ENST00000458407 597 ntBASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 AC120498.10-201ENST00000621827 505 ntBASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 DPP3P2-201ENST00000416030 1696 ntBASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSM4Q9Y4Z0 TREX1-205ENST00000625293 1783 ntBASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSM4Q9Y4Z0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 AC093484.2-201ENST00000580996 2166 ntBASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 SLC7A5P1-201ENST00000568957 537 ntBASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.86■□□□□ 0.13
LSM4Q9Y4Z0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms