Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 COX11P1-201ENST00000489116 835 ntBASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 PRELID1P1-202ENST00000567272 903 ntBASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 AC005332.1-201ENST00000577698 1310 ntBASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCN4Q9Y3Q4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 AL671277.2-201ENST00000458060 996 ntBASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 AP005242.2-201ENST00000580065 1175 ntBASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HCN4Q9Y3Q4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HCN4Q9Y3Q4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 HOMER2P1-201ENST00000455653 964 ntBASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN4Q9Y3Q4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HCN4Q9Y3Q4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 AC080038.3-201ENST00000623346 1952 ntBASIC20.39■□□□□ 0.85
HCN4Q9Y3Q4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.38■□□□□ 0.85
HCN4Q9Y3Q4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms