Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 AC137761.2-201ENST00000561729 223 ntBASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 AC145350.3-201ENST00000569033 163 ntBASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMP2BQ9UQN3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 MFSD11-216ENST00000590393 1141 ntBASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 AL020996.1-203ENST00000536896 2307 ntBASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 KRT8P17-201ENST00000453110 1448 ntBASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CHMP2BQ9UQN3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 KRT18P11-201ENST00000435214 1283 ntBASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 RARRES2P4-201ENST00000514074 484 ntBASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 AC087623.3-201ENST00000607047 1098 ntBASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 AP000974.1-201ENST00000623909 2387 ntBASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP2BQ9UQN3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 AC009237.14-201ENST00000609975 1594 ntBASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms