Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SATB2Q9UPW6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 AL355075.4-201ENST00000554988 638 ntBASIC19.42■□□□□ 0.7
SATB2Q9UPW6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SATB2Q9UPW6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 RARRES2P10-201ENST00000564312 460 ntBASIC19.41■□□□□ 0.7
SATB2Q9UPW6 AL356652.1-201ENST00000615962 565 ntBASIC19.41■□□□□ 0.7
SATB2Q9UPW6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SATB2Q9UPW6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SATB2Q9UPW6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SATB2Q9UPW6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SATB2Q9UPW6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
SATB2Q9UPW6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms