Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 PHGDH-210ENST00000641115 1638 ntBASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.37■■□□□ 1.01
UBQLN1Q9UMX0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 AL512408.1-201ENST00000569378 2000 ntBASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 KRT16P5-201ENST00000455284 522 ntBASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 AC018553.1-201ENST00000616682 1458 ntBASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 TFP1-202ENST00000475455 1573 ntBASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.36■■□□□ 1.01
UBQLN1Q9UMX0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 RARRES2P10-201ENST00000564312 460 ntBASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 Z99916.2-201ENST00000604037 246 ntBASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 AC004264.1-201ENST00000608354 794 ntBASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.35■■□□□ 1.01
UBQLN1Q9UMX0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AL162377.1-201ENST00000618844 1793 ntBASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AC012618.2-201ENST00000428058 849 ntBASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN1Q9UMX0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 AL135905.2-201ENST00000584934 1404 ntBASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
UBQLN1Q9UMX0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBQLN1Q9UMX0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms