Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DUX4Q9UBX2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUX4Q9UBX2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 KRT16P2-201ENST00000414673 1423 ntBASIC17.4■□□□□ 0.38
DUX4Q9UBX2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 AC120498.10-201ENST00000621827 505 ntBASIC17.4■□□□□ 0.38
DUX4Q9UBX2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUX4Q9UBX2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.39■□□□□ 0.38
DUX4Q9UBX2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DUX4Q9UBX2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DUX4Q9UBX2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 BID-214ENST00000617586 542 ntTSL 5 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DUX4Q9UBX2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DUX4Q9UBX2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DUX4Q9UBX2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.38■□□□□ 0.37
DUX4Q9UBX2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms