Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 KRT16P5-201ENST00000455284 522 ntBASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 RARRES2P10-201ENST00000564312 460 ntBASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 MIR4497-201ENST00000583208 89 ntBASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 AP001412.1-201ENST00000608405 714 ntBASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE7Q9UBL6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 AC020907.5-201ENST00000624372 1936 ntBASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 SNORA78-201ENST00000459373 127 ntBASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 AC004264.1-201ENST00000608354 794 ntBASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE7Q9UBL6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 AL049637.2-201ENST00000641778 930 ntBASIC19.27■□□□□ 0.68
CPNE7Q9UBL6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CPNE7Q9UBL6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE7Q9UBL6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE7Q9UBL6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 AC116351.2-201ENST00000606540 1585 ntBASIC19.26■□□□□ 0.67
CPNE7Q9UBL6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms