Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.27■□□□□ 0.52
LRFN1Q9P244 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 AL049637.2-201ENST00000641778 930 ntBASIC18.27■□□□□ 0.52
LRFN1Q9P244 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN1Q9P244 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LRFN1Q9P244 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 KRT16P5-201ENST00000455284 522 ntBASIC18.26■□□□□ 0.51
LRFN1Q9P244 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN1Q9P244 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
LRFN1Q9P244 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 AC004264.1-201ENST00000608354 794 ntBASIC18.25■□□□□ 0.51
LRFN1Q9P244 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN1Q9P244 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN1Q9P244 KRT17P2-201ENST00000300992 1314 ntBASIC18.24■□□□□ 0.51
LRFN1Q9P244 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 TSPY7P-201ENST00000431358 1114 ntBASIC18.24■□□□□ 0.51
LRFN1Q9P244 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRFN1Q9P244 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN1Q9P244 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN1Q9P244 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms