Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 BX323043.1-201ENST00000641006 1765 ntBASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 AC125437.2-201ENST00000625180 2167 ntBASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 AC018445.3-201ENST00000624177 1945 ntBASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 AL162412.1-201ENST00000567129 965 ntBASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 AL158211.5-201ENST00000623583 2518 ntBASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
LIN7CQ9NUP9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 AC091799.1-201ENST00000422823 811 ntBASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 CDCA4P2-201ENST00000441182 718 ntBASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 CDV3P1-201ENST00000471403 739 ntBASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 AL591742.1-201ENST00000604433 565 ntBASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LIN7CQ9NUP9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 AC087289.5-201ENST00000586076 3175 ntBASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 CNN2P6-201ENST00000439038 900 ntBASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms