Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.04■□□□□ 0.64
NECTIN3Q9NQS3 BX323043.1-201ENST00000641006 1765 ntBASIC19.04■□□□□ 0.64
NECTIN3Q9NQS3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.03■□□□□ 0.64
NECTIN3Q9NQS3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 SMG8-203ENST00000578922 2178 ntBASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
NECTIN3Q9NQS3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NECTIN3Q9NQS3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NECTIN3Q9NQS3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
NECTIN3Q9NQS3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NECTIN3Q9NQS3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NECTIN3Q9NQS3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 AC018445.3-201ENST00000624177 1945 ntBASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NECTIN3Q9NQS3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19■□□□□ 0.63
NECTIN3Q9NQS3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NECTIN3Q9NQS3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 RNA5SP413-201ENST00000516373 109 ntBASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 CD99P1-205ENST00000527459 561 ntBASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms