Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4BQ9NPR2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4BQ9NPR2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4BQ9NPR2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4BQ9NPR2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SEMA4BQ9NPR2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 AC080038.1-201ENST00000611274 1154 ntBASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 AC008694.1-202ENST00000636953 945 ntBASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4BQ9NPR2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 AC007322.1-201ENST00000426983 750 ntBASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 CYP2T3P-201ENST00000601990 817 ntBASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 AC231657.2-201ENST00000624556 255 ntBASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4BQ9NPR2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 AC087289.5-201ENST00000586076 3175 ntBASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SEMA4BQ9NPR2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA4BQ9NPR2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SEMA4BQ9NPR2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SEMA4BQ9NPR2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4BQ9NPR2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA4BQ9NPR2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms