Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 AC091799.1-201ENST00000422823 811 ntBASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 AC069152.1-201ENST00000438030 544 ntBASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TIMMDC1Q9NPL8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 MIPEPP3-201ENST00000412105 444 ntBASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 AC073210.2-201ENST00000430369 194 ntBASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
TIMMDC1Q9NPL8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 FAM21FP-204ENST00000608637 956 ntBASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TIMMDC1Q9NPL8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMMDC1Q9NPL8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMMDC1Q9NPL8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 AC010980.2-201ENST00000587099 1412 ntBASIC19.01■□□□□ 0.63
TIMMDC1Q9NPL8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms