Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD248Q9HCU0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CD248Q9HCU0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 AC105020.6-201ENST00000621523 1217 ntBASIC20.8■□□□□ 0.92
CD248Q9HCU0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CD248Q9HCU0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD248Q9HCU0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 AC092368.3-202ENST00000574180 1591 ntBASIC20.79■□□□□ 0.92
CD248Q9HCU0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CD248Q9HCU0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 AC116050.2-201ENST00000612102 1779 ntBASIC20.79■□□□□ 0.92
CD248Q9HCU0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 SMG8-203ENST00000578922 2178 ntBASIC20.79■□□□□ 0.92
CD248Q9HCU0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD248Q9HCU0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD248Q9HCU0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.78■□□□□ 0.92
CD248Q9HCU0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms