Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.65■□□□□ 0.58
CHD8Q9HCK8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHD8Q9HCK8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CHD8Q9HCK8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.64■□□□□ 0.58
CHD8Q9HCK8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 MIR574-201ENST00000385209 96 ntBASIC18.64■□□□□ 0.57
CHD8Q9HCK8 MRPL3P1-201ENST00000400109 1033 ntBASIC18.64■□□□□ 0.57
CHD8Q9HCK8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 AP000692.2-201ENST00000608391 879 ntBASIC18.64■□□□□ 0.57
CHD8Q9HCK8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD8Q9HCK8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 MFAP1P1-201ENST00000442257 1255 ntBASIC18.63■□□□□ 0.57
CHD8Q9HCK8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 KRT8P8-201ENST00000434750 1448 ntBASIC18.63■□□□□ 0.57
CHD8Q9HCK8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 TSPY17P-201ENST00000450329 467 ntBASIC18.63■□□□□ 0.57
CHD8Q9HCK8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CHD8Q9HCK8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 TSPY12P-201ENST00000421279 868 ntBASIC18.62■□□□□ 0.57
CHD8Q9HCK8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD8Q9HCK8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 RNA5SP419-201ENST00000515908 135 ntBASIC18.61■□□□□ 0.57
CHD8Q9HCK8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AC020928.2-201ENST00000588717 2197 ntBASIC18.61■□□□□ 0.57
CHD8Q9HCK8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 AC079781.3-201ENST00000449110 356 ntBASIC18.61■□□□□ 0.57
CHD8Q9HCK8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 SLC25A1P1-201ENST00000528351 927 ntBASIC18.61■□□□□ 0.57
CHD8Q9HCK8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD8Q9HCK8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 SPDYE13P-201ENST00000445314 798 ntBASIC18.6■□□□□ 0.57
CHD8Q9HCK8 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
CHD8Q9HCK8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms