Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 AC137761.2-201ENST00000561729 223 ntBASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 AC145350.3-201ENST00000569033 163 ntBASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 AC016405.3-201ENST00000607710 860 ntBASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2J3Q9H1A7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.33■□□□□ 0.53
POLR2J3Q9H1A7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 MFSD11-216ENST00000590393 1141 ntBASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
POLR2J3Q9H1A7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 KRT8P17-201ENST00000453110 1448 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 PTBP1P-201ENST00000554374 1601 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 AC105020.6-201ENST00000621523 1217 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 AC009237.14-201ENST00000609975 1594 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 AC005332.7-201ENST00000614046 2005 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 KRT16P6-202ENST00000425692 1426 ntBASIC18.32■□□□□ 0.52
POLR2J3Q9H1A7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms