Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41e-8■□□□□ 8.1
FTOQ9C0B1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.395e-6■□□□□ 8.1
FTOQ9C0B1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.3■□□□□ 0.361e-10■□□□□ 8.1
FTOQ9C0B1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.351e-8■□□□□ 8.1
FTOQ9C0B1 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.165e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.165e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.125e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.065e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-208ENST00000476522 1931 ntTSL 514.29□□□□□ -0.125e-6■□□□□ 8.1
FTOQ9C0B1 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC14.28□□□□□ -0.121e-10■□□□□ 8.1
FTOQ9C0B1 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.175e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-205ENST00000429769 912 ntTSL 513.54□□□□□ -0.245e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-204ENST00000415904 649 ntTSL 313.06□□□□□ -0.325e-6■□□□□ 8.1
FTOQ9C0B1 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC12.52□□□□□ -0.415e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.455e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.565e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.585e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.675e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC10.85□□□□□ -0.675e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-206ENST00000467601 717 ntTSL 210.77□□□□□ -0.695e-6■□□□□ 8.1
FTOQ9C0B1 SEPT9-225ENST00000589250 527 ntTSL 210.73□□□□□ -0.691e-10■□□□□ 8.1
FTOQ9C0B1 EEF1B2-206ENST00000435123 389 ntTSL 59.9□□□□□ -0.825e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.035e-6■□□□□ 8.1
FTOQ9C0B1 YY1-205ENST00000554804 1114 ntTSL 37.94□□□□□ -1.145e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-203ENST00000594527 357 ntTSL 37.73□□□□□ -1.175e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-205ENST00000463586 3771 ntTSL 27.56□□□□□ -1.25e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-208ENST00000455150 670 ntTSL 57.38□□□□□ -1.235e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.255e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-206ENST00000596272 508 ntTSL 27.1□□□□□ -1.275e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.345e-6■□□□□ 8.1
FTOQ9C0B1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.575e-12■□□□□ 8.1
FTOQ9C0B1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.966e-24■□□□□ 8
FTOQ9C0B1 UBALD2-202ENST00000587913 286 ntTSL 313.43□□□□□ -0.266e-24■□□□□ 8
FTOQ9C0B1 COL9A3-213ENST00000489045 838 ntTSL 526.43■■□□□ 1.824e-9■□□□□ 8
FTOQ9C0B1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.11■■□□□ 1.454e-17■□□□□ 8
FTOQ9C0B1 VWCE-204ENST00000535599 883 ntTSL 220.57■□□□□ 0.884e-9■□□□□ 8
FTOQ9C0B1 VWCE-201ENST00000301770 3368 ntTSL 1 (best)17.33■□□□□ 0.374e-9■□□□□ 8
FTOQ9C0B1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.354e-9■□□□□ 8
FTOQ9C0B1 RPS6-201ENST00000315377 863 ntTSL 3 BASIC14.25□□□□□ -0.134e-17■□□□□ 8
FTOQ9C0B1 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.824e-17■□□□□ 8
FTOQ9C0B1 RPS6-205ENST00000498815 480 ntTSL 24.63□□□□□ -1.674e-17■□□□□ 8
FTOQ9C0B1 FBL-210ENST00000599159 1400 ntTSL 1 (best)25.45■■□□□ 1.669e-17■□□□□ 8
FTOQ9C0B1 FBL-203ENST00000594309 603 ntTSL 225.03■■□□□ 1.69e-17■□□□□ 8
FTOQ9C0B1 FBL-211ENST00000601274 877 ntTSL 525.03■■□□□ 1.69e-17■□□□□ 8
FTOQ9C0B1 FBL-209ENST00000599134 500 ntTSL 524.02■■□□□ 1.449e-17■□□□□ 8
FTOQ9C0B1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.239e-17■□□□□ 8
FTOQ9C0B1 PLA2G12A-204ENST00000507961 755 ntTSL 222.06■■□□□ 1.123e-6■□□□□ 8
FTOQ9C0B1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.13e-6■□□□□ 8
FTOQ9C0B1 FBL-208ENST00000598417 581 ntTSL 521.63■■□□□ 1.059e-17■□□□□ 8
FTOQ9C0B1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.8■□□□□ 0.923e-6■□□□□ 8
FTOQ9C0B1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.99■□□□□ 0.793e-6■□□□□ 8
FTOQ9C0B1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.693e-6■□□□□ 8
FTOQ9C0B1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.633e-6■□□□□ 8
FTOQ9C0B1 FBL-207ENST00000597634 726 ntTSL 517.53■□□□□ 0.49e-17■□□□□ 8
FTOQ9C0B1 RPA2-205ENST00000444045 682 ntTSL 516.89■□□□□ 0.293e-6■□□□□ 8
FTOQ9C0B1 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.153e-6■□□□□ 8
FTOQ9C0B1 FBL-204ENST00000594443 805 ntTSL 314.99□□□□□ -0.019e-17■□□□□ 8
FTOQ9C0B1 NASP-205ENST00000437901 874 ntTSL 513.18□□□□□ -0.33e-6■□□□□ 8
FTOQ9C0B1 NASP-212ENST00000527359 743 ntTSL 313.15□□□□□ -0.33e-6■□□□□ 8
FTOQ9C0B1 NASP-211ENST00000525515 565 ntTSL 513.12□□□□□ -0.313e-6■□□□□ 8
FTOQ9C0B1 NASP-204ENST00000437362 999 ntTSL 213.04□□□□□ -0.323e-6■□□□□ 8
FTOQ9C0B1 NASP-206ENST00000453748 2080 ntTSL 211.83□□□□□ -0.513e-6■□□□□ 8
FTOQ9C0B1 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 510.87□□□□□ -0.673e-6■□□□□ 8
FTOQ9C0B1 FBL-206ENST00000597224 732 ntTSL 39.49□□□□□ -0.899e-17■□□□□ 8
FTOQ9C0B1 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.444e-27■□□□□ 8
FTOQ9C0B1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-26■□□□□ 8
FTOQ9C0B1 CRLF1-202ENST00000593286 514 ntTSL 417.81■□□□□ 0.443e-26■□□□□ 8
Retrieved 68 of 7,068 protein–RNA pairs in 30.3 ms