Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41e-8■□□□□ 8.1
FTOQ9C0B1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.395e-6■□□□□ 8.1
FTOQ9C0B1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.3■□□□□ 0.361e-10■□□□□ 8.1
FTOQ9C0B1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.351e-8■□□□□ 8.1
FTOQ9C0B1 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.165e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.165e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.125e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.065e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-208ENST00000476522 1931 ntTSL 514.29□□□□□ -0.125e-6■□□□□ 8.1
FTOQ9C0B1 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC14.28□□□□□ -0.121e-10■□□□□ 8.1
FTOQ9C0B1 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.175e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-205ENST00000429769 912 ntTSL 513.54□□□□□ -0.245e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-204ENST00000415904 649 ntTSL 313.06□□□□□ -0.325e-6■□□□□ 8.1
FTOQ9C0B1 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC12.52□□□□□ -0.415e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.455e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.565e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.585e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.675e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC10.85□□□□□ -0.675e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-206ENST00000467601 717 ntTSL 210.77□□□□□ -0.695e-6■□□□□ 8.1
FTOQ9C0B1 SEPT9-225ENST00000589250 527 ntTSL 210.73□□□□□ -0.691e-10■□□□□ 8.1
FTOQ9C0B1 EEF1B2-206ENST00000435123 389 ntTSL 59.9□□□□□ -0.825e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.035e-6■□□□□ 8.1
FTOQ9C0B1 YY1-205ENST00000554804 1114 ntTSL 37.94□□□□□ -1.145e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-203ENST00000594527 357 ntTSL 37.73□□□□□ -1.175e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-205ENST00000463586 3771 ntTSL 27.56□□□□□ -1.25e-6■□□□□ 8.1
FTOQ9C0B1 EEF1B2-208ENST00000455150 670 ntTSL 57.38□□□□□ -1.235e-6■□□□□ 8.1
FTOQ9C0B1 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.255e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-206ENST00000596272 508 ntTSL 27.1□□□□□ -1.275e-6■□□□□ 8.1
FTOQ9C0B1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.345e-6■□□□□ 8.1
FTOQ9C0B1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.575e-12■□□□□ 8.1
FTOQ9C0B1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.966e-24■□□□□ 8
FTOQ9C0B1 UBALD2-202ENST00000587913 286 ntTSL 313.43□□□□□ -0.266e-24■□□□□ 8
FTOQ9C0B1 COL9A3-213ENST00000489045 838 ntTSL 526.43■■□□□ 1.824e-9■□□□□ 8
FTOQ9C0B1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.11■■□□□ 1.454e-17■□□□□ 8
FTOQ9C0B1 VWCE-204ENST00000535599 883 ntTSL 220.57■□□□□ 0.884e-9■□□□□ 8
FTOQ9C0B1 VWCE-201ENST00000301770 3368 ntTSL 1 (best)17.33■□□□□ 0.374e-9■□□□□ 8
FTOQ9C0B1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.354e-9■□□□□ 8
FTOQ9C0B1 RPS6-201ENST00000315377 863 ntTSL 3 BASIC14.25□□□□□ -0.134e-17■□□□□ 8
FTOQ9C0B1 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.824e-17■□□□□ 8
FTOQ9C0B1 RPS6-205ENST00000498815 480 ntTSL 24.63□□□□□ -1.674e-17■□□□□ 8
FTOQ9C0B1 FBL-210ENST00000599159 1400 ntTSL 1 (best)25.45■■□□□ 1.669e-17■□□□□ 8
FTOQ9C0B1 FBL-203ENST00000594309 603 ntTSL 225.03■■□□□ 1.69e-17■□□□□ 8
FTOQ9C0B1 FBL-211ENST00000601274 877 ntTSL 525.03■■□□□ 1.69e-17■□□□□ 8
FTOQ9C0B1 FBL-209ENST00000599134 500 ntTSL 524.02■■□□□ 1.449e-17■□□□□ 8
FTOQ9C0B1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.239e-17■□□□□ 8
FTOQ9C0B1 PLA2G12A-204ENST00000507961 755 ntTSL 222.06■■□□□ 1.123e-6■□□□□ 8
FTOQ9C0B1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.13e-6■□□□□ 8
FTOQ9C0B1 FBL-208ENST00000598417 581 ntTSL 521.63■■□□□ 1.059e-17■□□□□ 8
FTOQ9C0B1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.8■□□□□ 0.923e-6■□□□□ 8
FTOQ9C0B1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.99■□□□□ 0.793e-6■□□□□ 8
FTOQ9C0B1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.693e-6■□□□□ 8
FTOQ9C0B1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.633e-6■□□□□ 8
FTOQ9C0B1 FBL-207ENST00000597634 726 ntTSL 517.53■□□□□ 0.49e-17■□□□□ 8
FTOQ9C0B1 RPA2-205ENST00000444045 682 ntTSL 516.89■□□□□ 0.293e-6■□□□□ 8
FTOQ9C0B1 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.153e-6■□□□□ 8
FTOQ9C0B1 FBL-204ENST00000594443 805 ntTSL 314.99□□□□□ -0.019e-17■□□□□ 8
FTOQ9C0B1 NASP-205ENST00000437901 874 ntTSL 513.18□□□□□ -0.33e-6■□□□□ 8
FTOQ9C0B1 NASP-212ENST00000527359 743 ntTSL 313.15□□□□□ -0.33e-6■□□□□ 8
FTOQ9C0B1 NASP-211ENST00000525515 565 ntTSL 513.12□□□□□ -0.313e-6■□□□□ 8
FTOQ9C0B1 NASP-204ENST00000437362 999 ntTSL 213.04□□□□□ -0.323e-6■□□□□ 8
FTOQ9C0B1 NASP-206ENST00000453748 2080 ntTSL 211.83□□□□□ -0.513e-6■□□□□ 8
FTOQ9C0B1 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 510.87□□□□□ -0.673e-6■□□□□ 8
FTOQ9C0B1 FBL-206ENST00000597224 732 ntTSL 39.49□□□□□ -0.899e-17■□□□□ 8
FTOQ9C0B1 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.444e-27■□□□□ 8
FTOQ9C0B1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-26■□□□□ 8
FTOQ9C0B1 CRLF1-202ENST00000593286 514 ntTSL 417.81■□□□□ 0.443e-26■□□□□ 8
Retrieved 68 of 7,068 protein–RNA pairs in 25.5 ms