Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 FAM220CP-201ENST00000395253 831 ntBASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 AC079776.4-201ENST00000511039 504 ntBASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3Q9BZ76 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AL136038.3-201ENST00000561909 1096 ntBASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 AC124283.5-201ENST00000624661 1809 ntBASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3Q9BZ76 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 AC097488.1-201ENST00000507834 756 ntBASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 AC141257.4-201ENST00000634557 245 ntBASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 AC136944.6-201ENST00000634818 245 ntBASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3Q9BZ76 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 AL031008.1-201ENST00000619963 541 ntBASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3Q9BZ76 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 AL355385.1-201ENST00000606123 409 ntBASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms