Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 SOX15-203ENST00000570788 1093 ntBASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 MIR2861-201ENST00000636310 90 ntBASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 GABARAPL3-202ENST00000624044 1851 ntBASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCGF1Q9BSM1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 AC128676.1-201ENST00000454392 318 ntBASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.61■□□□□ 0.25
PCGF1Q9BSM1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 PRORSD1P-201ENST00000295112 541 ntBASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 UNC93B4-201ENST00000505679 747 ntBASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 AC008687.6-201ENST00000596318 630 ntBASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 FP700111.2-201ENST00000619190 1892 ntBASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCGF1Q9BSM1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms