Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 AC008687.6-201ENST00000596318 630 ntBASIC17.68■□□□□ 0.42
USB1Q9BQ65 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USB1Q9BQ65 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USB1Q9BQ65 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 AC073648.6-201ENST00000641589 218 ntBASIC17.67■□□□□ 0.42
USB1Q9BQ65 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USB1Q9BQ65 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.67■□□□□ 0.42
USB1Q9BQ65 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USB1Q9BQ65 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.66■□□□□ 0.42
USB1Q9BQ65 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 GCSHP5-201ENST00000443090 522 ntBASIC17.65■□□□□ 0.42
USB1Q9BQ65 UBE2SP1-201ENST00000450587 669 ntBASIC17.65■□□□□ 0.42
USB1Q9BQ65 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 AC142381.4-202ENST00000563973 229 ntBASIC17.65■□□□□ 0.42
USB1Q9BQ65 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 AC120498.8-201ENST00000614275 531 ntBASIC17.65■□□□□ 0.42
USB1Q9BQ65 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.65■□□□□ 0.42
USB1Q9BQ65 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USB1Q9BQ65 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USB1Q9BQ65 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
USB1Q9BQ65 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.64■□□□□ 0.41
USB1Q9BQ65 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 HLA-G-202ENST00000376815 851 ntBASIC17.64■□□□□ 0.41
USB1Q9BQ65 HLA-G-203ENST00000376818 1127 ntBASIC17.64■□□□□ 0.41
USB1Q9BQ65 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms