Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXC2Q99958 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
FOXC2Q99958 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXC2Q99958 DUSP5P1-201ENST00000441325 1139 ntBASIC16.78■□□□□ 0.28
FOXC2Q99958 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXC2Q99958 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXC2Q99958 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXC2Q99958 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXC2Q99958 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXC2Q99958 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXC2Q99958 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
FOXC2Q99958 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXC2Q99958 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 AC092647.4-201ENST00000457211 535 ntBASIC16.77■□□□□ 0.28
FOXC2Q99958 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
FOXC2Q99958 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.77■□□□□ 0.28
FOXC2Q99958 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 AL445675.2-201ENST00000620291 557 ntBASIC16.77■□□□□ 0.28
FOXC2Q99958 AL121956.5-201ENST00000625261 221 ntBASIC16.77■□□□□ 0.28
FOXC2Q99958 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXC2Q99958 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXC2Q99958 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXC2Q99958 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.77■□□□□ 0.27
FOXC2Q99958 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.77■□□□□ 0.27
FOXC2Q99958 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXC2Q99958 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXC2Q99958 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXC2Q99958 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 TSPY5P-201ENST00000426936 936 ntBASIC16.76■□□□□ 0.27
FOXC2Q99958 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 B3GAT3P1-201ENST00000471720 806 ntBASIC16.76■□□□□ 0.27
FOXC2Q99958 AC097488.1-201ENST00000507834 756 ntBASIC16.76■□□□□ 0.27
FOXC2Q99958 AC139887.4-201ENST00000607877 719 ntBASIC16.76■□□□□ 0.27
FOXC2Q99958 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXC2Q99958 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
FOXC2Q99958 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 PCED1CP-201ENST00000419887 785 ntBASIC16.75■□□□□ 0.27
FOXC2Q99958 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXC2Q99958 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXC2Q99958 AL138966.2-201ENST00000621997 464 ntBASIC16.75■□□□□ 0.27
FOXC2Q99958 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXC2Q99958 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXC2Q99958 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
FOXC2Q99958 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
FOXC2Q99958 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms