Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
S1PR3Q99500 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
S1PR3Q99500 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
S1PR3Q99500 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
S1PR3Q99500 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
S1PR3Q99500 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.39■□□□□ 0.21
S1PR3Q99500 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
S1PR3Q99500 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.39■□□□□ 0.21
S1PR3Q99500 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.39■□□□□ 0.21
S1PR3Q99500 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 AC105020.6-201ENST00000621523 1217 ntBASIC16.39■□□□□ 0.21
S1PR3Q99500 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
S1PR3Q99500 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
S1PR3Q99500 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.38■□□□□ 0.21
S1PR3Q99500 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 MIR663A-201ENST00000385250 93 ntBASIC16.38■□□□□ 0.21
S1PR3Q99500 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
S1PR3Q99500 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.38■□□□□ 0.21
S1PR3Q99500 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.38■□□□□ 0.21
S1PR3Q99500 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.38■□□□□ 0.21
S1PR3Q99500 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.38■□□□□ 0.21
S1PR3Q99500 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
S1PR3Q99500 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
S1PR3Q99500 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 BCL2-203ENST00000589955 5011 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 CROCCP5-201ENST00000436658 830 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 AC006970.2-201ENST00000450065 779 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.37■□□□□ 0.21
S1PR3Q99500 CYP2T3P-201ENST00000601990 817 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 AL589743.5-201ENST00000616611 1050 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 BX119927.1-201ENST00000636596 1552 ntBASIC16.37■□□□□ 0.21
S1PR3Q99500 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.37■□□□□ 0.21
S1PR3Q99500 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
S1PR3Q99500 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
S1PR3Q99500 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
S1PR3Q99500 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms