Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.15■□□□□ 0.98
TWNKQ96RR1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TWNKQ96RR1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
TWNKQ96RR1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.15■□□□□ 0.98
TWNKQ96RR1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TWNKQ96RR1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TWNKQ96RR1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TWNKQ96RR1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TWNKQ96RR1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TWNKQ96RR1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 ITM2C-210ENST00000620962 501 ntBASIC21.14■□□□□ 0.97
TWNKQ96RR1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.14■□□□□ 0.97
TWNKQ96RR1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TWNKQ96RR1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TWNKQ96RR1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TWNKQ96RR1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TWNKQ96RR1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 PRORSD1P-201ENST00000295112 541 ntBASIC21.13■□□□□ 0.97
TWNKQ96RR1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TWNKQ96RR1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 PHGDH-210ENST00000641115 1638 ntBASIC21.13■□□□□ 0.97
TWNKQ96RR1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TWNKQ96RR1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TWNKQ96RR1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 KRT17P3-201ENST00000420566 1262 ntBASIC21.12■□□□□ 0.97
TWNKQ96RR1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 AC018553.1-201ENST00000616682 1458 ntBASIC21.12■□□□□ 0.97
TWNKQ96RR1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TWNKQ96RR1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TWNKQ96RR1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 AC116351.2-201ENST00000606540 1585 ntBASIC21.11■□□□□ 0.97
TWNKQ96RR1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 MTDHP1-201ENST00000605323 784 ntBASIC21.11■□□□□ 0.97
TWNKQ96RR1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TWNKQ96RR1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TWNKQ96RR1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms