Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
DUX3Q96PT4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.46■□□□□ 0.07
DUX3Q96PT4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.46■□□□□ 0.07
DUX3Q96PT4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
DUX3Q96PT4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
DUX3Q96PT4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
DUX3Q96PT4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
DUX3Q96PT4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.46■□□□□ 0.07
DUX3Q96PT4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
DUX3Q96PT4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
DUX3Q96PT4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
DUX3Q96PT4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.46■□□□□ 0.06
DUX3Q96PT4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
DUX3Q96PT4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
DUX3Q96PT4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.46■□□□□ 0.06
DUX3Q96PT4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.46■□□□□ 0.06
DUX3Q96PT4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
DUX3Q96PT4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.45■□□□□ 0.06
DUX3Q96PT4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DUX3Q96PT4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 Z99916.2-201ENST00000604037 246 ntBASIC15.44■□□□□ 0.06
DUX3Q96PT4 AC124016.1-201ENST00000609552 612 ntBASIC15.44■□□□□ 0.06
DUX3Q96PT4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.44■□□□□ 0.06
DUX3Q96PT4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DUX3Q96PT4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 AC007225.1-201ENST00000566331 1836 ntBASIC15.43■□□□□ 0.06
DUX3Q96PT4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 DPP3P2-201ENST00000416030 1696 ntBASIC15.43■□□□□ 0.06
DUX3Q96PT4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
DUX3Q96PT4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.43■□□□□ 0.06
DUX3Q96PT4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms