Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN4Q96NY8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 HMGA1P5-201ENST00000412453 271 ntBASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 AL358472.4-201ENST00000633140 710 ntBASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN4Q96NY8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 C9orf163-202ENST00000624034 2573 ntBASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 FAM8A6P-201ENST00000407496 1135 ntBASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 AC011506.1-201ENST00000474329 610 ntBASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN4Q96NY8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN4Q96NY8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN4Q96NY8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN4Q96NY8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN4Q96NY8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN4Q96NY8 KRT8P17-201ENST00000453110 1448 ntBASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 AC004980.1-204ENST00000429707 299 ntBASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN4Q96NY8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN4Q96NY8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 RNF152P1-201ENST00000397754 604 ntBASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 AC117947.1-201ENST00000427448 529 ntBASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 MYC-208ENST00000641036 567 ntBASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN4Q96NY8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN4Q96NY8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms