Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00477Q96M19 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 KRT8P20-201ENST00000423953 1409 ntBASIC14.89□□□□□ -0.03
LINC00477Q96M19 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00477Q96M19 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00477Q96M19 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00477Q96M19 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00477Q96M19 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00477Q96M19 AL158211.5-201ENST00000623583 2518 ntBASIC14.89□□□□□ -0.03
LINC00477Q96M19 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 RARRES2P4-201ENST00000514074 484 ntBASIC14.88□□□□□ -0.03
LINC00477Q96M19 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 AC137761.2-201ENST00000561729 223 ntBASIC14.88□□□□□ -0.03
LINC00477Q96M19 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 AC145350.3-201ENST00000569033 163 ntBASIC14.88□□□□□ -0.03
LINC00477Q96M19 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 AC016405.3-201ENST00000607710 860 ntBASIC14.88□□□□□ -0.03
LINC00477Q96M19 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00477Q96M19 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00477Q96M19 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 AC116562.4-201ENST00000641316 2276 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 HLA-G-202ENST00000376815 851 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 HLA-G-203ENST00000376818 1127 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 KRT18P68-201ENST00000392293 1000 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 AL031963.3-201ENST00000606441 850 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 MIR6821-201ENST00000617625 74 ntBASIC14.87□□□□□ -0.03
LINC00477Q96M19 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LINC00477Q96M19 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00477Q96M19 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 BX323043.1-201ENST00000641006 1765 ntBASIC14.86□□□□□ -0.03
LINC00477Q96M19 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 AC016769.1-201ENST00000409132 1010 ntBASIC14.86□□□□□ -0.03
LINC00477Q96M19 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.86□□□□□ -0.03
LINC00477Q96M19 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 MFSD11-216ENST00000590393 1141 ntBASIC14.86□□□□□ -0.03
LINC00477Q96M19 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00477Q96M19 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00477Q96M19 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms