Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC023632.3-201ENST00000521633 145 ntBASIC20.08■□□□□ 0.81
LRRC39Q96DD0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.08■□□□□ 0.81
LRRC39Q96DD0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC39Q96DD0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 AC006015.1-201ENST00000429970 570 ntBASIC20.07■□□□□ 0.8
LRRC39Q96DD0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC39Q96DD0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.06■□□□□ 0.8
LRRC39Q96DD0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC39Q96DD0 AC087289.5-201ENST00000586076 3175 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 CYP2T1P-201ENST00000432607 1285 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC011767.1-201ENST00000617410 1153 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC231657.2-201ENST00000624556 255 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 AC008694.1-202ENST00000636953 945 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 PHGDH-210ENST00000641115 1638 ntBASIC20.05■□□□□ 0.8
LRRC39Q96DD0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC39Q96DD0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 AL589743.5-201ENST00000616611 1050 ntBASIC20.04■□□□□ 0.8
LRRC39Q96DD0 OR10C1-204ENST00000622521 1039 ntBASIC20.04■□□□□ 0.8
LRRC39Q96DD0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms