Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.85■□□□□ 0.77
ULK4Q96C45 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.85■□□□□ 0.77
ULK4Q96C45 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ULK4Q96C45 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ULK4Q96C45 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.85■□□□□ 0.77
ULK4Q96C45 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ULK4Q96C45 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ULK4Q96C45 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.84■□□□□ 0.77
ULK4Q96C45 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.84■□□□□ 0.77
ULK4Q96C45 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 PNMA6B-201ENST00000538162 1200 ntBASIC19.84■□□□□ 0.77
ULK4Q96C45 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.84■□□□□ 0.77
ULK4Q96C45 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.84■□□□□ 0.77
ULK4Q96C45 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.84■□□□□ 0.77
ULK4Q96C45 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ULK4Q96C45 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.83■□□□□ 0.77
ULK4Q96C45 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.83■□□□□ 0.77
ULK4Q96C45 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ULK4Q96C45 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.83■□□□□ 0.77
ULK4Q96C45 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
ULK4Q96C45 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ULK4Q96C45 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ULK4Q96C45 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ULK4Q96C45 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.83■□□□□ 0.77
ULK4Q96C45 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.83■□□□□ 0.77
ULK4Q96C45 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.83■□□□□ 0.77
ULK4Q96C45 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.83■□□□□ 0.77
ULK4Q96C45 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.83■□□□□ 0.77
ULK4Q96C45 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.83■□□□□ 0.77
ULK4Q96C45 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ULK4Q96C45 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.83■□□□□ 0.76
ULK4Q96C45 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ULK4Q96C45 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.83■□□□□ 0.76
ULK4Q96C45 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.83■□□□□ 0.76
ULK4Q96C45 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
ULK4Q96C45 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ULK4Q96C45 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ULK4Q96C45 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ULK4Q96C45 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ULK4Q96C45 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ULK4Q96C45 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ULK4Q96C45 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.81■□□□□ 0.76
ULK4Q96C45 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 AC099778.1-201ENST00000568593 1911 ntBASIC19.81■□□□□ 0.76
ULK4Q96C45 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.81■□□□□ 0.76
ULK4Q96C45 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.81■□□□□ 0.76
ULK4Q96C45 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.81■□□□□ 0.76
ULK4Q96C45 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.81■□□□□ 0.76
ULK4Q96C45 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.81■□□□□ 0.76
ULK4Q96C45 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ULK4Q96C45 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ULK4Q96C45 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ULK4Q96C45 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ULK4Q96C45 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms