Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 AC004408.2-201ENST00000623613 2777 ntBASIC19.07■□□□□ 0.64
VPS33AQ96AX1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 AC097381.1-201ENST00000429019 1296 ntBASIC19.07■□□□□ 0.64
VPS33AQ96AX1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 AC087633.2-202ENST00000565166 1439 ntBASIC19.07■□□□□ 0.64
VPS33AQ96AX1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS33AQ96AX1 TNXA-203ENST00000507684 2038 ntBASIC19.07■□□□□ 0.64
VPS33AQ96AX1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS33AQ96AX1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 KRT19P1-201ENST00000405746 1186 ntBASIC19.05■□□□□ 0.64
VPS33AQ96AX1 PGM5P4-201ENST00000421970 445 ntBASIC19.05■□□□□ 0.64
VPS33AQ96AX1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS33AQ96AX1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS33AQ96AX1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms