Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 MIR4497-201ENST00000583208 89 ntBASIC20.92■□□□□ 0.94
ATP2A3Q93084 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 AC006128.1-201ENST00000624704 1661 ntBASIC20.92■□□□□ 0.94
ATP2A3Q93084 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A3Q93084 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2A3Q93084 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2A3Q93084 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATP2A3Q93084 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP2A3Q93084 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP2A3Q93084 Z99916.2-201ENST00000604037 246 ntBASIC20.91■□□□□ 0.94
ATP2A3Q93084 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A3Q93084 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 AC239809.2-201ENST00000415381 517 ntBASIC20.9■□□□□ 0.94
ATP2A3Q93084 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ATP2A3Q93084 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A3Q93084 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.89■□□□□ 0.94
ATP2A3Q93084 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A3Q93084 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 AC133681.1-201ENST00000465482 601 ntBASIC20.89■□□□□ 0.93
ATP2A3Q93084 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 AC124016.1-201ENST00000609552 612 ntBASIC20.89■□□□□ 0.93
ATP2A3Q93084 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A3Q93084 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ATP2A3Q93084 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A3Q93084 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2A3Q93084 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2A3Q93084 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A3Q93084 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2A3Q93084 AL023875.1-201ENST00000640777 796 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms