Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RPGRQ92834 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
RPGRQ92834 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RPGRQ92834 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.59■■□□□ 1.53
RPGRQ92834 LIN28AP1-201ENST00000429574 405 ntBASIC24.59■■□□□ 1.53
RPGRQ92834 AC104076.2-201ENST00000448912 469 ntBASIC24.59■■□□□ 1.53
RPGRQ92834 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RPGRQ92834 AC010203.1-204ENST00000548782 407 ntBASIC24.59■■□□□ 1.53
RPGRQ92834 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.59■■□□□ 1.53
RPGRQ92834 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RPGRQ92834 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.59■■□□□ 1.53
RPGRQ92834 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.59■■□□□ 1.53
RPGRQ92834 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
RPGRQ92834 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
RPGRQ92834 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RPGRQ92834 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RPGRQ92834 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RPGRQ92834 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.58■■□□□ 1.53
RPGRQ92834 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.58■■□□□ 1.53
RPGRQ92834 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RPGRQ92834 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RPGRQ92834 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RPGRQ92834 B3GAT3P1-201ENST00000471720 806 ntBASIC24.58■■□□□ 1.53
RPGRQ92834 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RPGRQ92834 NTF6B-201ENST00000591913 560 ntBASIC24.58■■□□□ 1.53
RPGRQ92834 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RPGRQ92834 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
RPGRQ92834 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.58■■□□□ 1.53
RPGRQ92834 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 AC005229.4-201ENST00000610085 2198 ntBASIC24.57■■□□□ 1.52
RPGRQ92834 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.57■■□□□ 1.52
RPGRQ92834 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.57■■□□□ 1.52
RPGRQ92834 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RPGRQ92834 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.57■■□□□ 1.52
RPGRQ92834 ATP5G1P1-201ENST00000448724 379 ntBASIC24.57■■□□□ 1.52
RPGRQ92834 AP005242.2-201ENST00000580065 1175 ntBASIC24.57■■□□□ 1.52
RPGRQ92834 DGCR10-201ENST00000609839 495 ntBASIC24.57■■□□□ 1.52
RPGRQ92834 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.57■■□□□ 1.52
RPGRQ92834 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 AC116351.2-201ENST00000606540 1585 ntBASIC24.57■■□□□ 1.52
RPGRQ92834 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
RPGRQ92834 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPGRQ92834 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.57■■□□□ 1.52
RPGRQ92834 DPP3P2-201ENST00000416030 1696 ntBASIC24.56■■□□□ 1.52
RPGRQ92834 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.56■■□□□ 1.52
RPGRQ92834 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.56■■□□□ 1.52
RPGRQ92834 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.56■■□□□ 1.52
RPGRQ92834 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.56■■□□□ 1.52
RPGRQ92834 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.56■■□□□ 1.52
RPGRQ92834 YBX1P10-201ENST00000444752 975 ntBASIC24.56■■□□□ 1.52
RPGRQ92834 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.56■■□□□ 1.52
RPGRQ92834 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
RPGRQ92834 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RPGRQ92834 FP700111.2-201ENST00000619190 1892 ntBASIC24.55■■□□□ 1.52
RPGRQ92834 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RPGRQ92834 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.55■■□□□ 1.52
RPGRQ92834 FEM1AP4-201ENST00000443167 1987 ntBASIC24.55■■□□□ 1.52
RPGRQ92834 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPGRQ92834 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPGRQ92834 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 ECEL1P2-202ENST00000465689 757 ntBASIC24.55■■□□□ 1.52
RPGRQ92834 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 EGLN1P1-201ENST00000531623 762 ntBASIC24.55■■□□□ 1.52
RPGRQ92834 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPGRQ92834 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RPGRQ92834 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 CRYGFP-201ENST00000418459 633 ntBASIC24.54■■□□□ 1.52
RPGRQ92834 AC011506.1-201ENST00000474329 610 ntBASIC24.54■■□□□ 1.52
RPGRQ92834 AC097488.1-201ENST00000507834 756 ntBASIC24.54■■□□□ 1.52
RPGRQ92834 AC087388.1-201ENST00000571370 1112 ntBASIC24.54■■□□□ 1.52
RPGRQ92834 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RPGRQ92834 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.54■■□□□ 1.52
RPGRQ92834 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPGRQ92834 TFP1-202ENST00000475455 1573 ntBASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms