Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNIP1Q8TAD8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 FAM8A6P-201ENST00000407496 1135 ntBASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNIP1Q8TAD8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 MESTP1-201ENST00000404287 994 ntBASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.77■□□□□ 0.6
SNIP1Q8TAD8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SNIP1Q8TAD8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SNIP1Q8TAD8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SNIP1Q8TAD8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.77■□□□□ 0.59
SNIP1Q8TAD8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 CRYGFP-201ENST00000418459 633 ntBASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 FAM87A-204ENST00000613235 858 ntBASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.76■□□□□ 0.59
SNIP1Q8TAD8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 C1orf229-201ENST00000623686 2258 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms