Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 TCF3P1-201ENST00000423021 1937 ntBASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 AC069152.1-201ENST00000438030 544 ntBASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 BX119927.1-201ENST00000636596 1552 ntBASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SIMC1Q8NDZ2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SIMC1Q8NDZ2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
SIMC1Q8NDZ2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIMC1Q8NDZ2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 KRT8P17-201ENST00000453110 1448 ntBASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms