Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 PRKY-204ENST00000533551 1019 ntBASIC20.35■□□□□ 0.85
KDM1BQ8NB78 AC110285.5-201ENST00000611501 352 ntBASIC20.35■□□□□ 0.85
KDM1BQ8NB78 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 KRT8P20-201ENST00000423953 1409 ntBASIC20.35■□□□□ 0.85
KDM1BQ8NB78 AL121603.2-201ENST00000557373 2117 ntBASIC20.35■□□□□ 0.85
KDM1BQ8NB78 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.35■□□□□ 0.85
KDM1BQ8NB78 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 AL023875.1-201ENST00000640777 796 ntBASIC20.34■□□□□ 0.85
KDM1BQ8NB78 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDM1BQ8NB78 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM1BQ8NB78 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM1BQ8NB78 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.33■□□□□ 0.84
KDM1BQ8NB78 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM1BQ8NB78 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.33■□□□□ 0.84
KDM1BQ8NB78 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.33■□□□□ 0.84
KDM1BQ8NB78 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 AL121906.2-201ENST00000621597 723 ntBASIC20.32■□□□□ 0.84
KDM1BQ8NB78 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM1BQ8NB78 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AL135905.2-201ENST00000584934 1404 ntBASIC20.31■□□□□ 0.84
KDM1BQ8NB78 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AC012618.2-201ENST00000428058 849 ntBASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 AC007225.1-201ENST00000566331 1836 ntBASIC20.31■□□□□ 0.84
KDM1BQ8NB78 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM1BQ8NB78 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
KDM1BQ8NB78 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM1BQ8NB78 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KDM1BQ8NB78 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.3■□□□□ 0.84
KDM1BQ8NB78 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
KDM1BQ8NB78 KRT8P17-201ENST00000453110 1448 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms