Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA6Q8N139 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA6Q8N139 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA6Q8N139 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 CD70-202ENST00000423145 881 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
ABCA6Q8N139 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA6Q8N139 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AL359075.1-203ENST00000462729 1002 ntBASIC29.67■■■□□ 2.34
ABCA6Q8N139 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC29.67■■■□□ 2.34
ABCA6Q8N139 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA6Q8N139 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
ABCA6Q8N139 PCED1CP-201ENST00000419887 785 ntBASIC29.66■■■□□ 2.34
ABCA6Q8N139 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
ABCA6Q8N139 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC29.66■■■□□ 2.34
ABCA6Q8N139 AC116407.4-201ENST00000623319 1061 ntBASIC29.66■■■□□ 2.34
ABCA6Q8N139 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC29.66■■■□□ 2.34
ABCA6Q8N139 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA6Q8N139 GUSBP5-202ENST00000510805 1989 ntBASIC29.66■■■□□ 2.34
ABCA6Q8N139 AC116351.2-201ENST00000606540 1585 ntBASIC29.66■■■□□ 2.34
ABCA6Q8N139 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA6Q8N139 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.65■■■□□ 2.34
ABCA6Q8N139 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 AC007663.1-201ENST00000438948 1240 ntBASIC29.65■■■□□ 2.34
ABCA6Q8N139 AC083849.1-201ENST00000615227 514 ntBASIC29.65■■■□□ 2.34
ABCA6Q8N139 AC093458.2-201ENST00000623150 629 ntBASIC29.65■■■□□ 2.34
ABCA6Q8N139 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC29.65■■■□□ 2.34
ABCA6Q8N139 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
ABCA6Q8N139 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA6Q8N139 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA6Q8N139 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
ABCA6Q8N139 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC29.64■■■□□ 2.34
ABCA6Q8N139 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA6Q8N139 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA6Q8N139 AP000692.2-201ENST00000608391 879 ntBASIC29.64■■■□□ 2.34
ABCA6Q8N139 STK25-204ENST00000405585 1643 ntTSL 2 BASIC29.64■■■□□ 2.34
ABCA6Q8N139 AC005332.1-201ENST00000577698 1310 ntBASIC29.64■■■□□ 2.34
ABCA6Q8N139 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.64■■■□□ 2.33
ABCA6Q8N139 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
ABCA6Q8N139 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
ABCA6Q8N139 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
ABCA6Q8N139 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.33
ABCA6Q8N139 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 AL450487.1-201ENST00000426799 995 ntBASIC29.63■■■□□ 2.33
ABCA6Q8N139 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 HCG4P8-203ENST00000443049 980 ntBASIC29.63■■■□□ 2.33
ABCA6Q8N139 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 AC011298.2-201ENST00000617989 482 ntBASIC29.63■■■□□ 2.33
ABCA6Q8N139 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.63■■■□□ 2.33
ABCA6Q8N139 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA6Q8N139 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 IER3-202ENST00000376377 1350 ntBASIC29.62■■■□□ 2.33
ABCA6Q8N139 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms