Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.39■□□□□ 0.54
C9orf40Q8IXQ3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
C9orf40Q8IXQ3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 PHGDH-210ENST00000641115 1638 ntBASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C9orf40Q8IXQ3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 AC116351.2-201ENST00000606540 1585 ntBASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 AC112907.3-201ENST00000577781 2400 ntBASIC18.38■□□□□ 0.53
C9orf40Q8IXQ3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 C1QBPP2-201ENST00000528754 825 ntBASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 AC018553.1-201ENST00000616682 1458 ntBASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf40Q8IXQ3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 GCSHP5-201ENST00000443090 522 ntBASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 AL023875.1-201ENST00000640777 796 ntBASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf40Q8IXQ3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 TCF3P1-201ENST00000423021 1937 ntBASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf40Q8IXQ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms