Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC124283.5-201ENST00000624661 1809 ntBASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 TCF3P1-201ENST00000423021 1937 ntBASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.94■□□□□ 0.94
SCUBE3Q8IX30 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 AC008687.6-201ENST00000596318 630 ntBASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
SCUBE3Q8IX30 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 ESRRAP1-201ENST00000400596 1257 ntBASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 RPS2P52-201ENST00000469610 820 ntBASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 AC026366.1-201ENST00000488803 879 ntBASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 AP003097.1-201ENST00000530657 1135 ntBASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCUBE3Q8IX30 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCUBE3Q8IX30 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCUBE3Q8IX30 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms