Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 AC006557.6-201ENST00000623071 864 ntBASIC18.95■□□□□ 0.62
RAB43Q86YS6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB43Q86YS6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB43Q86YS6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
RAB43Q86YS6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 AC239809.2-201ENST00000415381 517 ntBASIC18.94■□□□□ 0.62
RAB43Q86YS6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.94■□□□□ 0.62
RAB43Q86YS6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB43Q86YS6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 MTDHP1-201ENST00000605323 784 ntBASIC18.93■□□□□ 0.62
RAB43Q86YS6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB43Q86YS6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB43Q86YS6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB43Q86YS6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB43Q86YS6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms